Publications Click from the links below for our lab members’ publications: Current Brittany Lasseigne Vishal Oza TC Howton Lizzy Wilk Amanda Clark Tabea Soelter Emma Jones Alumni Jen Fisher Jordan Whitlock Victoria Flanary Avery Williams Drew Hardigan Kasi McPherson
New Publication in Cancer Reports! Evaluating cancer cell line and patient-derived xenograft recapitulation of tumor and non-diseased tissue gene expression profiles in silico October 11, 2023
New Publication in Cancer Reports! Inferring chromosomal instability from copy number aberrations as a measure of chromosomal instability across human cancers October 11, 2023
New Publication in Molecular Medicine! Prioritized polycystic kidney disease drug targets and repurposing candidates from pre-cystic and cystic mouse Pkd2 model gene expression reversion May 9, 2023
New Publication in Briefings in Functional Genomics! Quantifying transcriptome diversity Review May 7, 2023
CoSIA R Bioconductor package and Shiny app for CrOss Species Investigation and Analysis (Preprinted & Under Review; available on Bioconductor) May 5, 2023
Sex-biased gene expression and gene-regulatory networks of sex-biased adverse event drug targets and drug metabolism genes (Preprinted & Under Review) May 4, 2023
Signature reversion of three disease-associated gene signatures prioritizes cancer drug repurposing candidates (Preprinted & Under Review) May 1, 2023
Computational Advancements in Drug Repurposing for Cancer Combination Therapy Prediction (Preprinted & Under Review) April 30, 2023
Evaluating cancer cell line and patient-derived xenograft recapitulation of tumor and non-diseased tissue gene expression profiles (Preprinted & In Revision) April 27, 2023
Inferring chromosomal instability from copy number aberrations as a measure of chromosomal instability across human cancers (Preprinted & Under Review) April 26, 2023
New Publication in PeerJ! CINmetrics an R package for analyzing copy number aberrations as a measure of chromosomal instability (CINmetrics is available on CRAN) April 25, 2023
New Publication in PLOS Computational Biology! Ten simple rules for using public biological data for your research February 16, 2023
Liquid Biopsies in Epilepsy (Published in Human Cell), Considerations and challenges for sex-aware drug repurposing (Published in Biology of Sex Differences), and Nucleic Acid Liquid Biopsies in Alzheimer's Disease (Published in Heliyon) February 2, 2023
A role for GLUT3 in glioblastoma cell invasion that is not recapitulated by GLUT1 (Published in Cell Adhesion & Migration) January 26, 2023